ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9bdoC1 - ECOD Domain | ECOD

ECOD/Domains/e9bdoC1

e9bdoC1

UID: 005254583

PDB

Range: C:1-117
PDB: 9BDO chain C(all domains)

Molecule: TCE01 NANOBODY VHH

3D Structure

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Related Domains

Browse other domains in V-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyV-set(11.1.1.99)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Acetate ion, Glycerol, Sulfate ion)

Acetate ionACT
GlycerolGOL
Sulfate ionSO4

Shown in the structure viewer.

Pfam Families

Immunoglobulin V-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 9BDO RCSB PDB: 9BDO PDBe: 9BDO

Downloads

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