ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9bgeC1 - ECOD Domain | ECOD

ECOD/Domains/e9bgeC1

e9bgeC1

UID: 005255119

PDB

Range: C:1-153,C:155-170,C:203-225,C:279-292,C:376-396,C:427-456
PDB: 9BGE chain C(all domains)

Molecule: 426c.WITO.TM.SOSIP

3D Structure

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Related Domains

Browse other domains in GP120 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupgp120 inner domain(1061)

HH-groupgp120 inner domain(1061.1)

TT-groupgp120 inner domain(1061.1.1)

FFamilyGP120(1061.1.1.1)

Ligands

in contact, ≤ 4 Å

2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

Shown in the structure viewer.

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 9BGE RCSB PDB: 9BGE PDBe: 9BGE

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Full PDB Structure