ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9dq1B1 - ECOD Domain | ECOD

ECOD/Domains/e9dq1B1

e9dq1B1

UID: 005271323

PDB

Range: B:1-228
PDB: 9DQ1 chain B(all domains)

Molecule: BsmA domain containing protein

3D Structure

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Related Domains

Browse other domains in 2OG-Fe_Oxy_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamily2OG-Fe_Oxy_2(10.12.1.43)

Ligands

in contact, ≤ 4 Å

6-nitro-L-norleucine6HN
2-OXOGLUTARIC ACIDAKG
Iodide ionIOD
MANGANESE (II) IONMN
metal

+ 2 additives (1,2-ETHANEDIOL, Glycerol)

1,2-ETHANEDIOLEDO

Pfam Families

PF100142OG-Fe_Oxy_2

2OG-Fe dioxygenase

ClanCL0029Cupin

External Links

ECOD PDB View: 9DQ1 RCSB PDB: 9DQ1 PDBe: 9DQ1

Downloads

Download Domain PDB Full PDB Structure

GlycerolGOL

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