ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9drsA1 - ECOD Domain | ECOD

ECOD/Domains/e9drsA1

e9drsA1

UID: 005271571

PDB

Range: A:75-341
PDB: 9DRS chain A(all domains)
UniProt: P9WFU3 (all domains)
Gene: pheS

Molecule: Phenylalanine--tRNA ligase alpha subunit

3D Structure

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Related Domains

Browse other domains in tRNA-synt_2d →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_2d(314.1.1.3)

Ligands

in contact, ≤ 4 Å

1H-benzimidazol-2-amineAX7
Magnesium ionMG
metal

+ 3 additives (Acetate ion, Dimethyl sulfoxide, 1,2-ETHANEDIOL)

Acetate ionACT
Dimethyl sulfoxideDMS
1,2-ETHANEDIOLEDO

Pfam Families

PF01409tRNA-synt_2d

tRNA synthetases class II core domain (F)

ClanCL0040tRNA_synt_II

External Links

ECOD PDB View: 9DRS RCSB PDB: 9DRS PDBe: 9DRS UniProt: P9WFU3

Downloads

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