ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9e17A1 - ECOD Domain | ECOD

ECOD/Domains/e9e17A1

e9e17A1

UID: 005273074

PDB

Range: A:4545-4583,A:4628-4742,A:4765-5033
PDB: 9E17 chain A(all domains)
UniProt: P11716 (all domains)
Gene: RYR1

Molecule: Ryanodine receptor 1

3D Structure

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Related Domains

Browse other domains in Ion_trans,RR_TM4-6 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyIon_trans,RR_TM4-6(5054.1.1.3)

Ligands

in contact, ≤ 4 Å

ADENOSINE-5'-TRIPHOSPHATEATP
Calcium ionCA
metal
CaffeineCFF
(2S)-3-(octadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphateL9R
Zinc ionZN
metal

Pfam Families

PF00520Ion_trans

Ion transport protein

ClanCL0030Ion_channel

PF06459RR_TM4-6

Ryanodine Receptor TM 4-6

External Links

ECOD PDB View: 9E17 RCSB PDB: 9E17 PDBe: 9E17 UniProt: P11716

Downloads

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