ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9er7M3 - ECOD Domain | ECOD

ECOD/Domains/e9er7M3

e9er7M3

UID: 005277770

PDB

Range: M:55-98,M:489-541
PDB: 9ER7 chain M(all domains)
UniProt: P0ACD8 (all domains)
Gene: hyaB

Molecule: Hydrogenase-1 large chain

3D Structure

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Related Domains

Browse other domains in NiFeSe_Hases →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4)

TT-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4.1)

FFamilyNiFeSe_Hases(244.4.1.2)

Ligands

in contact, ≤ 4 Å

Carbon monoxideCMO
CARBONMONOXIDE-(DICYANO) IRONFCO
Magnesium ionMG
metal
NICKEL (II) IONNI
metal
FE4-S3 CLUSTERSF3

Pfam Families

PF00374NiFeSe_Hases

Nickel-dependent hydrogenase

External Links

ECOD PDB View: 9ER7 RCSB PDB: 9ER7 PDBe: 9ER7 UniProt: P0ACD8

Downloads

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