ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9ercL4 - ECOD Domain | ECOD

ECOD/Domains/e9ercL4

e9ercL4

UID: 005277815

PDB

Range: L:38-80,L:464-511
PDB: 9ERC chain L(all domains)
UniProt: P0ACE0 (all domains)
Gene: hybC

Molecule: Hydrogenase-2 large chain

3D Structure

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Related Domains

Browse other domains in NiFeSe_Hases →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4)

TT-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4.1)

FFamilyNiFeSe_Hases(244.4.1.2)

Ligands

in contact, ≤ 4 Å

CARBONMONOXIDE-(DICYANO) IRONFCO
Magnesium ionMG
metal
NICKEL (II) IONNI
metal
Iron/sulfur clusterSF4

+ 1 additive (Glycerol)

Glycerol

Pfam Families

PF00374NiFeSe_Hases

Nickel-dependent hydrogenase

External Links

ECOD PDB View: 9ERC RCSB PDB: 9ERC PDBe: 9ERC UniProt: P0ACE0

Downloads

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