ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9es9I1 - ECOD Domain | ECOD

ECOD/Domains/e9es9I1

e9es9I1

UID: 005278230

PDB

Range: I:1-215
PDB: 9ES9 chain I(all domains)
UniProt: P00165 (all domains)
Gene: petB

Molecule: Cytochrome b6

3D Structure

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Related Domains

Browse other domains in Cytochrome_B →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTransmembrane heme-binding four-helical bundle(5069)

HH-groupTransmembrane heme-binding four-helical bundle(5069.1)

TT-groupTransmembrane di-heme cytochromes(5069.1.1)

FFamilyCytochrome_B(5069.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta-caroteneBCR
2,5-DIBROMO-3-ISOPROPYL-6-METHYLBENZO-1,4-QUINONEBNT
Chlorophyll aCLA
Heme cHEC
Protoporphyrin ix containing feHEM
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDELMG

Pfam Families

PF00033Cytochrome_B

Cytochrome b/b6/petB

ClanCL03282heme_cytochrom

External Links

ECOD PDB View: 9ES9 RCSB PDB: 9ES9 PDBe: 9ES9 UniProt: P00165

Downloads

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Undecyl-maltosideUMQ

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