ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9f2iB1 - ECOD Domain | ECOD

ECOD/Domains/e9f2iB1

e9f2iB1

UID: 005279897

PDB

Range: B:26-111
PDB: 9F2I chain B(all domains)

Molecule: Nucleoprotein

3D Structure

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Related Domains

Browse other domains in CoV_nucleocap →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupCoronavirus RNA-binding domain (N-terminal part of Pfam 00937)(704)

HH-groupCoronavirus RNA-binding domain (N-terminal part of Pfam 00937)(704.1)

TT-groupCoronavirus RNA-binding domain (N-terminal part of Pfam 00937)(704.1.1)

FFamilyCoV_nucleocap(704.1.1.1)

Ligands

in contact, ≤ 4 Å

2-amino-1,3-benzothiazol-6-olA1H88

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer.

Pfam Families

PF00937CoV_nucleocap

Coronavirus nucleocapsid

External Links

ECOD PDB View: 9F2I RCSB PDB: 9F2I PDBe: 9F2I

Downloads

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