ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2bopA1 - ECOD Domain | ECOD

ECOD/Domains/e2bopA1

e2bopA1

UID: 000005280

RepresentativePDB

Range: A:326-410
PDB: 2BOP chain A(all domains)
UniProt: P03122 (all domains)
Gene: E2

Molecule: PROTEIN (E2)

3D Structure

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Related Domains

Browse other domains in PPV_E2_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupViral DNA-binding domain(304.15)

TT-groupViral DNA-binding domain(304.15.1)

FFamilyPPV_E2_C(304.15.1.1)

Ligands

in contact, ≤ 4 Å

YTTERBIUM (III) IONYB
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00511PPV_E2_C

E2 (early) protein, C terminal

External Links

ECOD PDB View: 2BOP RCSB PDB: 2BOP PDBe: 2BOP UniProt: P03122

Downloads

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