ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1r8hA1 - ECOD Domain | ECOD

ECOD/Domains/e1r8hA1

e1r8hA1

UID: 000005281

RepresentativePDB

Range: A:281-366
PDB: 1R8H chain A(all domains)
UniProt: Q84294 (all domains)
Gene: E2

Molecule: Regulatory protein E2

3D Structure

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Related Domains

Browse other domains in PPV_E2_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupViral DNA-binding domain(304.15)

TT-groupViral DNA-binding domain(304.15.1)

FFamilyPPV_E2_C(304.15.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00511PPV_E2_C

E2 (early) protein, C terminal

External Links

ECOD PDB View: 1R8H RCSB PDB: 1R8H PDBe: 1R8H UniProt: Q84294

Downloads

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