ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9fsuV1 - ECOD Domain | ECOD

ECOD/Domains/e9fsuV1

e9fsuV1

UID: 005285718

PDB

Range: V:1-222
PDB: 9FSU chain V(all domains)
UniProt: P25043 (all domains)
Gene: PUP1

Molecule: Proteasome subunit beta type-2

3D Structure

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Related Domains

Browse other domains in Proteasome,Pr_beta_C →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupProteasome subunits(210.1.1)

FFamilyProteasome,Pr_beta_C(210.1.1.3)

Ligands

in contact, ≤ 4 Å

(2S)-N-[(2S)-1-[[(1S)-2-cyclohexyl-1-[(2R,3S,6R,7S)-3-methanoyl-2,6-dimethyl-6,7-bis(oxidanyl)-1,4-oxazepan-7-yl]ethyl]amino]-3-(4-methoxyphenyl)-1-oxidanylidene-propan-2-yl]-2-(2-morpholin-4-ylethanoylamino)-4-oxidanyl-butanamideA1IFL
Chloride ionCL
Magnesium ionMG
metal

+ 1 additive (2-(N-MORPHOLINO)-ETHANESULFONIC ACID)

2-(N-MORPHOLINO)-ETHANESULFONIC ACIDMES

Pfam Families

PF00227Proteasome

Proteasome subunit

ClanCL0052NTN

PF12465Pr_beta_C

Proteasome beta subunits C terminal

External Links

ECOD PDB View: 9FSU RCSB PDB: 9FSU PDBe: 9FSU UniProt: P25043

Downloads

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