ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e9ftzR1 - ECOD Domain | ECOD

ECOD/Domains/e9ftzR1

e9ftzR1

UID: 005285908

PDB

Range: R:34-561
PDB: 9FTZ chain R(all domains)
UniProt: A0A0D6HTJ9 (all domains)

Molecule: Cytochrome c oxidase subunit 1

3D Structure

Loading viewer...

Related Domains

Browse other domains in COX1 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupCytochrome c oxidase subunit I-like(5038)

HH-groupCytochrome c oxidase subunit I-like(5038.1)

TT-groupCytochrome c oxidase subunit I-like(5038.1.1)

FFamilyCOX1(5038.1.1.1)

Ligands

in contact, ≤ 4 Å

1,2-Distearoyl-sn-glycerophosphoethanolamine3PE
(2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate9XX
(2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate9YF
Calcium ionCA
metal
Cardiolipin

Pfam Families

Cytochrome C and Quinol oxidase polypeptide I

ClanCL0714COX1-like

External Links

ECOD PDB View: 9FTZ RCSB PDB: 9FTZ PDBe: 9FTZ UniProt: A0A0D6HTJ9

Downloads

Download Domain PDB Full PDB Structure

COPPER (II) IONCU

metal

Heme-aHEA

Magnesium ionMG

metal

MENAQUINONE-9MQ9

Palmitic acidPLM

TridecaneTRD

acyl-phosphatidyl-myo-inositol dimannoside (AcPIM2)WUO

Shown in the structure viewer.