ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9gaeg1 - ECOD Domain | ECOD

ECOD/Domains/e9gaeg1

e9gaeg1

UID: 005289979

PDB

Range: g:17-545
PDB: 9GAE chain g(all domains)
UniProt: P98002 (all domains)
Gene: ctaDII

Molecule: Cytochrome c oxidase subunit 1

3D Structure

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Related Domains

Browse other domains in this classification →

Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

1,2-Distearoyl-sn-glycerophosphoethanolamine3PE
1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE3PH
Calcium ionCA
metal
COPPER (II) IONCU
metal
2-[2-[(1~{S},2~{S},4~{S},5'~{R},6~{R},7~{S},8~{R},9~{S},12~{S},13~{R},16~{S})-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icos-18-ene-6,2'-oxane]-16-yl]oxyethyl]propane-1,3-diol

External Links

ECOD PDB View: 9GAE RCSB PDB: 9GAE PDBe: 9GAE UniProt: P98002

Downloads

Download Domain PDB Full PDB Structure

Heme-aHEA

MANGANESE (II) IONMN

metal

1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINEPC1

(1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATEPGT

PhosphatidylinositolT7X

Shown in the structure viewer.