ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9gkeA2 - ECOD Domain | ECOD

ECOD/Domains/e9gkeA2

e9gkeA2

UID: 005292028

PDB

Range: A:254-484,A:487-504
PDB: 9GKE chain A(all domains)

Molecule: Endoplasmic reticulum aminopeptidase 1

3D Structure

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Related Domains

Browse other domains in Peptidase_M1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M1(2498.1.1.9)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 2 additives (1,2-ETHANEDIOL, Phosphate ion)

1,2-ETHANEDIOLEDO
Phosphate ionPO4

Shown in the structure viewer.

Pfam Families

PF01433Peptidase_M1

Peptidase family M1 domain

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 9GKE RCSB PDB: 9GKE PDBe: 9GKE

Downloads

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