ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9gueA1 - ECOD Domain | ECOD

ECOD/Domains/e9gueA1

e9gueA1

UID: 005293241

PDB

Range: A:1-301
PDB: 9GUE chain A(all domains)

Molecule: 2'-O-methyltransferase nsp16

3D Structure

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Related Domains

Browse other domains in CoV_Methyltr_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyCoV_Methyltr_2(2003.1.5.56)

Ligands

in contact, ≤ 4 Å

7-[(3~{S},4~{S},6~{R})-1-[(2~{S})-2-azanyl-4-methyl-pentanoyl]-4-methyl-4,6-bis(oxidanyl)azepan-3-yl]-1,3-dimethyl-purine-2,6-dioneA1IO0
Chloride ionCL
S-adenosylmethionineSAM

+ 2 additives (1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID)

1,2-ETHANEDIOLEDO
2-(N-MORPHOLINO)-ETHANESULFONIC ACIDMES

Pfam Families

PF06460CoV_Methyltr_2

Coronavirus 2'-O-methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 9GUE RCSB PDB: 9GUE PDBe: 9GUE

Downloads

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