ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9hdqA5 - ECOD Domain | ECOD

ECOD/Domains/e9hdqA5

e9hdqA5

UID: 005295278

PDB

Range: A:980-1006,A:1015-1046,A:1053-1110,A:1117-1157,A:1161-1172,A:1176-1199,A:1211-1232,A:1234-1262,A:1268-1278
PDB: 9HDQ chain A(all domains)

Molecule: LINE-1 retrotransposable element ORF2 protein

3D Structure

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Related Domains

Browse other domains in RVT_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRVT_1(304.48.1.1)

Pfam Families

Reverse transcriptase (RNA-dependent DNA polymerase)

ClanCL0027RdRP

External Links

ECOD PDB View: 9HDQ RCSB PDB: 9HDQ PDBe: 9HDQ

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