ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9ivvA1 - ECOD Domain | ECOD

ECOD/Domains/e9ivvA1

e9ivvA1

UID: 005300956

PDB

Range: A:1-329
PDB: 9IVV chain A(all domains)
UniProt: Q16769 (all domains)
Gene: QPCT

Molecule: Glutaminyl-peptide cyclotransferase

3D Structure

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Related Domains

Browse other domains in Peptidase_M28 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyPeptidase_M28(2011.1.1.8)

Ligands

in contact, ≤ 4 Å

4-azanyl-~{N}-[2-(1~{H}-imidazol-4-yl)ethyl]-2-oxidanidyl-1,2,5-oxadiazol-2-ium-3-carboxamideA1D94
Zinc ionZN
metal

+ 3 additives (Dimethylformamide, Dimethyl sulfoxide, Glycerol)

DimethylformamideDMF
Dimethyl sulfoxideDMS
Glycerol

Pfam Families

PF04389Peptidase_M28

Peptidase family M28

ClanCL0865ZnExoPePases

External Links

ECOD PDB View: 9IVV RCSB PDB: 9IVV PDBe: 9IVV UniProt: Q16769

Downloads

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