ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9kukN1 - ECOD Domain | ECOD

ECOD/Domains/e9kukN1

e9kukN1

UID: 005306000

PDB

Range: N:1-514
PDB: 9KUK chain N(all domains)
UniProt: P00396 (all domains)
Gene: MT-CO1

Molecule: Cytochrome c oxidase subunit 1

3D Structure

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Related Domains

Browse other domains in this classification →

Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

CardiolipinCDL
Cholic acidCHD
COPPER (II) IONCU
metal
Decyl-beta-d-maltopyranosideDMU
Heme-aHEA
Eicosane

External Links

ECOD PDB View: 9KUK RCSB PDB: 9KUK PDBe: 9KUK UniProt: P00396

Downloads

Download Domain PDB Full PDB Structure

Magnesium ionMG

metal

Sodium ionNA

metal

(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATEPEK

Peroxide ionPER

(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATEPGV

XenonXE

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer.