ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9lo3A1 - ECOD Domain | ECOD

ECOD/Domains/e9lo3A1

e9lo3A1

UID: 005307342

PDB

Range: A:1-198
PDB: 9LO3 chain A(all domains)
UniProt: Q16774 (all domains)
Gene: GUK1

Molecule: Guanylate kinase

3D Structure

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Related Domains

Browse other domains in Guanylate_kin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyGuanylate_kin(2004.1.1.50)

Ligands

in contact, ≤ 4 Å

GUANOSINE-5'-MONOPHOSPHATE5GP
ADENOSINE-5'-DIPHOSPHATEADP
Tetrafluoroaluminate ionALF
Magnesium ionMG
metal

+ 2 additives (Glycerol, Triethylene glycol)

GlycerolGOL

Pfam Families

PF00625Guanylate_kin

Guanylate kinase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 9LO3 RCSB PDB: 9LO3 PDBe: 9LO3 UniProt: Q16774

Downloads

Download Domain PDB Full PDB Structure

Triethylene glycolPGE

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