ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1hbnA2 - ECOD Domain | ECOD

ECOD/Domains/e1hbnA2

e1hbnA2

UID: 000005331

RepresentativePDB

Range: A:2-269
PDB: 1HBN chain A(all domains)
UniProt: P11558 (all domains)
Gene: mcrA

Molecule: METHYL-COENZYME M REDUCTASE I ALPHA SUBUNIT

3D Structure

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Related Domains

Browse other domains in MCR_alpha_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupMethyl-coenzyme M reductase subunits(304.35)

TT-groupMethyl-coenzyme M reductase subunits(304.35.1)

FFamilyMCR_alpha_N(304.35.1.2)

Ligands

in contact, ≤ 4 Å

Coenzyme MCOM
drugDrugBank DB09110within 5 Å only
FACTOR 430F43
Magnesium ionMG

Pfam Families

PF02745MCR_alpha_N

Methyl-coenzyme M reductase alpha subunit, N-terminal domain

ClanCL0618MCR

External Links

ECOD PDB View: 1HBN RCSB PDB: 1HBN PDBe: 1HBN UniProt: P11558

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Sodium ionNA

metal

Coenzyme BTP7

Zinc ionZN

metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.