ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1hbnB2 - ECOD Domain | ECOD

ECOD/Domains/e1hbnB2

e1hbnB2

UID: 000005332

RepresentativePDB

Range: B:2-188
PDB: 1HBN chain B(all domains)
UniProt: P11560 (all domains)
Gene: mcrB

Molecule: METHYL-COENZYME M REDUCTASE I BETA SUBUNIT

3D Structure

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Related Domains

Browse other domains in MCR_beta_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupMethyl-coenzyme M reductase subunits(304.35)

TT-groupMethyl-coenzyme M reductase subunits(304.35.1)

FFamilyMCR_beta_N(304.35.1.3)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
Sodium ionNA
metal

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

PF02783MCR_beta_N

Methyl-coenzyme M reductase beta subunit, N-terminal domain

ClanCL0618MCR

External Links

ECOD PDB View: 1HBN RCSB PDB: 1HBN PDBe: 1HBN UniProt: P11560

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.