ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e11ciA2 - ECOD Domain | ECOD

ECOD/Domains/e11ciA2

e11ciA2

UID: 005333831

PDB

Range: A:74-215
PDB: 11CI chain A(all domains)

Molecule: Probable cell wall hydrolase LytN

3D Structure

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Related Domains

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Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyCHAP(219.1.1.28)

Ligands

in contact, ≤ 4 Å

N~2~-acetyl-N~6~-{(4M)-3-carboxy-4-[(10aR)-6-hydroxy-3-oxo-4,10a-dihydro-3H-xanthen-9-yl]benzene-1-carbonyl}-D-lysyl-L-alanyl-D-alpha-glutaminyl-N-[(2R)-3-oxobutan-2-yl]-L-lysinamideA1DEZ
Sodium ionNA
metal

Shown in the structure viewer.

Pfam Families

CHAP domain

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 11CI RCSB PDB: 11CI PDBe: 11CI

Downloads

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