ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e11jdA1 - ECOD Domain | ECOD

ECOD/Domains/e11jdA1

e11jdA1

UID: 005333847

PDB

Range: A:411-518
PDB: 11JD chain A(all domains)

Molecule: Major vault protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Vault_3 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupMajor vault protein (MVP) structural repeat domain(3529)

HH-groupMajor vault protein (MVP) structural repeat domain(3529.1)

TT-groupMajor vault protein (MVP) structural repeat domain(3529.1.1)

FFamilyVault_3(3529.1.1.3)

Ligands

in contact, ≤ 4 Å

[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL[HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATEAR6

Shown in the structure viewer.

Pfam Families

PF17795Vault_3

Major Vault Protein Repeat domain

ClanCL0666Vault

External Links

ECOD PDB View: 11JD RCSB PDB: 11JD PDBe: 11JD

Downloads

Download Domain PDB Full PDB Structure