ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e29taA1 - ECOD Domain | ECOD

ECOD/Domains/e29taA1

e29taA1

UID: 005334185

PDB

Range: A:0-180
PDB: 29TA chain A(all domains)

Molecule: RNA-directed RNA polymerase L

3D Structure

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Related Domains

Browse other domains in L_protein_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyL_protein_N(2008.1.1.65)

Ligands

in contact, ≤ 4 Å

9-oxidanyl-6-[(1-phenylcyclohexyl)methyl]-2-propan-2-yl-3,4-dihydropyrazino[1,2-c]pyrimidine-1,8-dioneA1J4F
MANGANESE (II) IONMN
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Shown in the structure viewer.

Pfam Families

PF15518L_protein_N

L protein N-terminus

ClanCL0236PDDEXK

External Links

ECOD PDB View: 29TA RCSB PDB: 29TA PDBe: 29TA

Downloads

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