ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9obtA1 - ECOD Domain | ECOD

ECOD/Domains/e9obtA1

e9obtA1

UID: 005334589

PDB

Range: A:550-840
PDB: 9OBT chain A(all domains)

Molecule: Glutamate receptor ionotropic, NMDA 1

3D Structure

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Related Domains

Browse other domains in Lig_chan →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyLig_chan(5054.1.1.1)

Ligands

in contact, ≤ 4 Å

CholesterolCLR
(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphatePOV

Shown in the structure viewer.

Pfam Families

PF00060Lig_chan

Ligand-gated ion channel

ClanCL0030Ion_channel

External Links

ECOD PDB View: 9OBT RCSB PDB: 9OBT PDBe: 9OBT

Downloads

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