ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9qxfA1 - ECOD Domain | ECOD

ECOD/Domains/e9qxfA1

e9qxfA1

UID: 005334900

PDB

Range: A:25-324
PDB: 9QXF chain A(all domains)

Molecule: Guanine-N7 methyltransferase nsp14

3D Structure

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Related Domains

Browse other domains in CoV_ExoN →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyCoV_ExoN(2484.1.1.52)

Ligands

in contact, ≤ 4 Å

5-chloranylthiophene-2-sulfonamide8K2
Zinc ionZN
metal

+ 4 additives (Dimethyl sulfoxide, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Glycerol, …)

Dimethyl sulfoxideDMS
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACIDEPE
Glycerol

Pfam Families

PF06471CoV_ExoN

Coronavirus proofreading exoribonuclease

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 9QXF RCSB PDB: 9QXF PDBe: 9QXF

Downloads

Download Domain PDB Full PDB Structure

Phosphate ionPO4

Shown in the structure viewer.