ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9td4A2 - ECOD Domain | ECOD

ECOD/Domains/e9td4A2

e9td4A2

UID: 005335376

PDB

Range: A:254-903
PDB: 9TD4 chain A(all domains)

Molecule: Endoplasmic reticulum aminopeptidase 1

3D Structure

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Related Domains

Browse other domains in ERAP1_C →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyERAP1_C(2498.1.1.159)

Ligands

in contact, ≤ 4 Å

1-[2-(2-oxidanylidene-5-phenyl-1,3-benzoxazol-3-yl)ethanoylamino]cyclohexane-1-carboxylic acidA1JVG
Zinc ionZN
metal

+ 2 additives (1,2-ETHANEDIOL, D-malate)

1,2-ETHANEDIOLEDO
D-malateMLT

Shown in the structure viewer.

Pfam Families

PF11838ERAP1_C

ERAP1-like C-terminal domain

ClanCL0159E-set

External Links

ECOD PDB View: 9TD4 RCSB PDB: 9TD4 PDBe: 9TD4

Downloads

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