ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9v5uA1 - ECOD Domain | ECOD

ECOD/Domains/e9v5uA1

e9v5uA1

UID: 005335652

PDB

Range: A:76-263
PDB: 9V5U chain A(all domains)

Molecule: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, apicoplastic

3D Structure

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Related Domains

Browse other domains in DXP_reductoisom →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyDXP_reductoisom(2003.1.1.33)

Ligands

in contact, ≤ 4 Å

[(1~{S})-4-[2-benzamidoethyl(oxidanyl)amino]-4-oxidanylidene-1-phenyl-butyl]phosphonic acidA1L9Z
Calcium ionCA
metal
MANGANESE (II) IONMN
metal

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer.

Pfam Families

PF02670DXP_reductoisom

1-deoxy-D-xylulose 5-phosphate reductoisomerase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 9V5U RCSB PDB: 9V5U PDBe: 9V5U

Downloads

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