ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9jvdC1 - ECOD Domain | ECOD

ECOD/Domains/e9jvdC1

e9jvdC1

UID: 005336905

PDB

Range: C:158-246
PDB: 9JVD chain C(all domains)

Molecule: Transcription elongation factor-like protein

3D Structure

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Related Domains

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Classification

AArchitecturealpha bundles(a.7)

XX-groupN-cbl like(611)

HH-groupConserved domain common to transcription factors TFIIS, elongin A, CRSP70(611.3)

TT-groupConserved domain common to transcription factors TFIIS, elongin A, CRSP70(611.3.1)

FFamilyMed26(611.3.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Malonate ion)

Malonate ionMLI

Shown in the structure viewer.

Pfam Families

TFIIS helical bundle-like domain

External Links

ECOD PDB View: 9JVD RCSB PDB: 9JVD PDBe: 9JVD

Downloads

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