ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e9nvvc1 - ECOD Domain | ECOD

ECOD/Domains/e9nvvc1

e9nvvc1

UID: 005337470

PDB

Range: c:519-657
PDB: 9NVV chain c(all domains)

Molecule: HIV envelope gp41 ectodomain

3D Structure

Loading viewer...

Related Domains

Browse other domains in GP41 →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupMPER trimer(3567)

HH-groupMPER trimer(3567.1)

TT-groupMPER trimer(3567.1.1)

FFamilyGP41(3567.1.1.2)

Ligands

in contact, ≤ 4 Å

2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

Shown in the structure viewer.

Pfam Families

Retroviral envelope protein

External Links

ECOD PDB View: 9NVV RCSB PDB: 9NVV PDBe: 9NVV

Downloads

Download Domain PDB Full PDB Structure