ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9rkiA1 - ECOD Domain | ECOD

ECOD/Domains/e9rkiA1

e9rkiA1

UID: 005337911

PDB

Range: A:29-342
PDB: 9RKI chain A(all domains)

Molecule: Beta-2 adrenergic receptor,Endolysin

3D Structure

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Related Domains

Browse other domains in 7tm_1 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFamily A G protein-coupled receptor-like(5001)

HH-groupFamily A G protein-coupled receptor-like(5001.1)

TT-groupFamily A G protein-coupled receptor-like(5001.1.1)

FFamily7tm_1(5001.1.1.1)

Ligands

in contact, ≤ 4 Å

Dodecaethylene glycol12P
~{N}-[4-[(~{E})-[2-[(2~{S})-2-oxidanyl-3-(propan-2-ylamino)propoxy]phenyl]diazenyl]phenyl]ethanamideA1JHU
AcetamideACM
CholesterolCLR
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLC
Palmitic acid

Pfam Families

7 transmembrane receptor (rhodopsin family)

ClanCL0192GPCR_A

External Links

ECOD PDB View: 9RKI RCSB PDB: 9RKI PDBe: 9RKI

Downloads

Download Domain PDB Full PDB Structure

+ 4 additives (Pentaethylene glycol, 1,2-ETHANEDIOL, Glycerol, …)

Pentaethylene glycol1PE
1,2-ETHANEDIOLEDO
GlycerolGOL
Sulfate ionSO4

Shown in the structure viewer.