ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9ruwA2 - ECOD Domain | ECOD

ECOD/Domains/e9ruwA2

e9ruwA2

UID: 005337998

PDB

Range: A:235-547
PDB: 9RUW chain A(all domains)

Molecule: Berberine bridge enzyme-like A

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFAD-linked oxidases, C-terminal domain(304.6)

TT-groupFAD-linked oxidases, C-terminal domain(304.6.1)

FFamilyBBE(304.6.1.3)

Ligands

in contact, ≤ 4 Å

Flavin-adenine dinucleotideFAD
2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Shown in the structure viewer.

Pfam Families

Berberine and berberine like

ClanCL0277FAD-oxidase_C

External Links

ECOD PDB View: 9RUW RCSB PDB: 9RUW PDBe: 9RUW

Downloads

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