ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9rzva1 - ECOD Domain | ECOD

ECOD/Domains/e9rzva1

e9rzva1

UID: 005338049

PDB

Range: a:2-458
PDB: 9RZV chain a(all domains)

Molecule: Cytochrome bd-I ubiquinol oxidase subunit 1

3D Structure

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Related Domains

Browse other domains in Cyt_bd_oxida_I →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTransmembrane heme-binding four-helical bundle(5069)

HH-groupTransmembrane heme-binding four-helical bundle(5069.1)

TT-groupTransmembrane di-heme cytochromes(5069.1.1)

FFamilyCyt_bd_oxida_I(5069.1.1.3)

Ligands

in contact, ≤ 4 Å

Trans-heme d hydroxychlorin gamma-spirolactoneA1JN4
Protoporphyrin ix containing feHEM
2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATELPP
MENAQUINONE-9MQ9
Oxygen moleculeOXY
(1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE

Pfam Families

PF01654Cyt_bd_oxida_I

Cytochrome bd terminal oxidase subunit I

External Links

ECOD PDB View: 9RZV RCSB PDB: 9RZV PDBe: 9RZV

Downloads

Download Domain PDB Full PDB Structure

Ubiquinone-8UQ8

Shown in the structure viewer.