ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9v90A2 - ECOD Domain | ECOD

ECOD/Domains/e9v90A2

e9v90A2

UID: 005338617

PDB

Range: A:179-273
PDB: 9V90 chain A(all domains)

Molecule: Syntenin-1

3D Structure

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Related Domains

Browse other domains in PDZ →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPDZ domain(7)

HH-groupPDZ domain(7.1)

TT-groupPDZ domain(7.1.1)

FFamilyPDZ(7.1.1.1)

Ligands

in contact, ≤ 4 Å

(2~{S})-2-[[(2~{S})-3-methyl-2-(3-oxidanylidene-1~{H}-isoindol-2-yl)butanoyl]amino]propanoic acidLKV

+ 1 additive (Acetate ion)

Acetate ionACT

Shown in the structure viewer.

Pfam Families

PDZ domain

ClanCL0466PDZ-like

External Links

ECOD PDB View: 9V90 RCSB PDB: 9V90 PDBe: 9V90

Downloads

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