ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9lqjA4 - ECOD Domain | ECOD

ECOD/Domains/e9lqjA4

e9lqjA4

UID: 005338793

PDB

Range: A:687-770
PDB: 9LQJ chain A(all domains)

Molecule: Collagenase ColH

3D Structure

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Related Domains

Browse other domains in PKD_4 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyPKD_4(11.1.1.284)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer.

Pfam Families

PKD domain

ClanCL0159E-set

External Links

ECOD PDB View: 9LQJ RCSB PDB: 9LQJ PDBe: 9LQJ

Downloads

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