ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9lrmG2 - ECOD Domain | ECOD

ECOD/Domains/e9lrmG2

e9lrmG2

UID: 005338799

PDB

Range: G:297-570
PDB: 9LRM chain G(all domains)

Molecule: Collagenase ColH

3D Structure

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Related Domains

Browse other domains in Peptidase_M9 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M9(2498.1.1.16)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Zinc ionZN
metal

Shown in the structure viewer.

Pfam Families

PF01752Peptidase_M9

Collagenase

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 9LRM RCSB PDB: 9LRM PDBe: 9LRM

Downloads

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