ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e28pqA1 - ECOD Domain | ECOD

ECOD/Domains/e28pqA1

e28pqA1

UID: 005338864

PDB

Range: A:17-241
PDB: 28PQ chain A(all domains)

Molecule: Nitric oxide reductase subunit B

3D Structure

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Related Domains

Browse other domains in NorB_cytochrome_c-like →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilyNorB_cytochrome_c-like(107.1.1.13)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Protoporphyrin ix containing feHEM
2,3-DIMETHOXY-5-METHYL-6-(3,11,15,19-TETRAMETHYL-EICOSA-2,6,10,14,18-PENTAENYL)-[1,4]BENZOQUINONEUQ5

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer.

Pfam Families

PF22085NorB_cytochrome_c-like

Nitric oxide reductase subunit B, cytochrome c-like domain

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 28PQ RCSB PDB: 28PQ PDBe: 28PQ

Downloads

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