ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9ycwC1 - ECOD Domain | ECOD

ECOD/Domains/e9ycwC1

e9ycwC1

UID: 005339097

PDB

Range: C:3-125
PDB: 9YCW chain C(all domains)

Molecule: Ubiquitin carboxyl-terminal hydrolase 16

3D Structure

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Related Domains

Browse other domains in zf-UBP →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-UBP(376.1.1.5)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer.

Pfam Families

Zn-finger in ubiquitin-hydrolases and other protein

ClanCL0229RING

External Links

ECOD PDB View: 9YCW RCSB PDB: 9YCW PDBe: 9YCW

Downloads

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