ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9yksB1 - ECOD Domain | ECOD

ECOD/Domains/e9yksB1

e9yksB1

UID: 005339108

PDB

Range: B:917-1188
PDB: 9YKS chain B(all domains)

Molecule: Histone-lysine N-methyltransferase EHMT2

3D Structure

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Related Domains

Browse other domains in SET →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupSET domain-like(70.3)

TT-groupSET domain-like(70.3.1)

FFamilySET(70.3.1.1)

Ligands

in contact, ≤ 4 Å

N~2~-[(7M)-6-fluoro-7-(2,5,6,7-tetrahydro-1H-azepin-4-yl)-2,3-dihydro-1-benzofuran-5-yl]-N~4~,6-dimethylpyrimidine-2,4-diamineA1CXM
S-adenosylmethionineSAM
Zinc ionZN
metal

+ 2 additives (1,2-ETHANEDIOL, Glycerol)

1,2-ETHANEDIOLEDO
Glycerol

Pfam Families

SET domain

ClanCL0489SAF

External Links

ECOD PDB View: 9YKS RCSB PDB: 9YKS PDBe: 9YKS

Downloads

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