ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5gh0A2 - ECOD Domain | ECOD

ECOD/Domains/e5gh0A2

e5gh0A2

UID: 005339392

PDB

Range: A:1-595
PDB: 5GH0 chain A(all domains)
UniProt: P80025 (all domains)
Gene: LPO

Molecule: Lactoperoxidase

3D Structure

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Related Domains

Browse other domains in An_peroxidase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupHeme-dependent peroxidases(136)

HH-groupHeme-dependent peroxidases(136.1)

TT-groupHeme-dependent peroxidases(136.1.1)

FFamilyAn_peroxidase(136.1.1.3)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Protoporphyrin ix containing feHEM
1,3-dihydroimidazole-2-thioneMZY
2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

+ 2 additives (Carbonate ion, Nitrate ion)

Carbonate ionCO3

Pfam Families

PF03098An_peroxidase

Animal haem peroxidase

ClanCL0617Peroxidase

External Links

ECOD PDB View: 5GH0 RCSB PDB: 5GH0 PDBe: 5GH0 UniProt: P80025

Downloads

Download Domain PDB Full PDB Structure

Nitrate ionNO3

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