ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9cg1A2 - ECOD Domain | ECOD

ECOD/Domains/e9cg1A2

e9cg1A2

UID: 005344462

PDB

Range: A:95-292
PDB: 9CG1 chain A(all domains)

Molecule: Radical SAM protein

3D Structure

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Related Domains

Browse other domains in Radical_SAM_2 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM_2(2002.1.1.455)

Ligands

in contact, ≤ 4 Å

CobalaminB12
Boric acidBO3
S-5'-AZAMETHIONINE-5'-DEOXYADENOSINESA8
Iron/sulfur clusterSF4

+ 2 additives (Glycerol, Imidazole)

GlycerolGOL
Imidazole

Pfam Families

PF19238Radical_SAM_2

Radical SAM-like domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 9CG1 RCSB PDB: 9CG1 PDBe: 9CG1

Downloads

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