ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9kdeA4 - ECOD Domain | ECOD

ECOD/Domains/e9kdeA4

e9kdeA4

UID: 005344718

PDB

Range: A:549-649
PDB: 9KDE chain A(all domains)

Molecule: Short transient receptor potential channel 3

3D Structure

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Related Domains

Browse other domains in TRP_2, YVC1_C →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyTRP_2, YVC1_C(5054.1.1.72)

Ligands

in contact, ≤ 4 Å

ethyl 4-[2-methyl-7-oxidanyl-3-[4-(trifluoromethyl)phenyl]pyrazolo[1,5-a]pyrimidin-5-yl]piperidine-1-carboxylateA1L5Q

Shown in the structure viewer.

Pfam Families

Transient receptor ion channel II

Calcium channel YVC1-like, C-terminal

ClanCL0030Ion_channel

External Links

ECOD PDB View: 9KDE RCSB PDB: 9KDE PDBe: 9KDE

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Full PDB Structure