ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9kc541 - ECOD Domain | ECOD

ECOD/Domains/e9kc541

e9kc541

UID: 005345261

PDB

Range: 4:112-219
PDB: 9KC5 chain 4(all domains)

Molecule: Light-harvesting complex protein

3D Structure

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Related Domains

Browse other domains in Chloroa_b-bind →

Classification

AArchitecturealpha bundles(a.7)

XX-groupPhotosystem II antenna protein-like(5075)

HH-groupPhotosystem II antenna protein-like(5075.1)

TT-groupPhotosystem II antenna protein-like(5075.1.1)

FFamilyChloroa_b-bind(5075.1.1.3)

Ligands

in contact, ≤ 4 Å

Zeaxanthin5X6
Beta-caroteneBCR
Chlorophyll aCLA
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLELHG
(3R)-beta,beta-caroten-3-olRRX
Unknown ligandUNL

Pfam Families

PF00504Chloroa_b-bind

Chlorophyll A-B binding protein

External Links

ECOD PDB View: 9KC5 RCSB PDB: 9KC5 PDBe: 9KC5

Downloads

Download Domain PDB Full PDB Structure

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer.