ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9ntgB2 - ECOD Domain | ECOD

ECOD/Domains/e9ntgB2

e9ntgB2

UID: 005345804

PDB

Range: B:120-223
PDB: 9NTG chain B(all domains)

Molecule: Helix pomatia AMP deaminase

3D Structure

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Related Domains

Browse other domains in A_deaminase,A_deaminase_N →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyA_deaminase,A_deaminase_N(2002.1.1.42)

Ligands

in contact, ≤ 4 Å

2'-DEOXYCOFORMYCINDCF
2-acetamido-2-deoxy-beta-D-glucopyranoseNAG
Zinc ionZN
metal

+ 2 additives (2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 1,2-ETHANEDIOL)

2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOLBTB
1,2-ETHANEDIOL

Pfam Families

PF00962A_deaminase

Adenosine deaminase

ClanCL0036TIM_barrel

PF08451A_deaminase_N

Adenosine/AMP deaminase N-terminal

External Links

ECOD PDB View: 9NTG RCSB PDB: 9NTG PDBe: 9NTG

Downloads

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