ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1riw.1 - ECOD Domain | ECOD

ECOD/Domains/e1riw.1

e1riw.1

UID: 005347299

RepresentativePDB

Range: A:7-34,B:1-147,C:1-102
PDB: 1RIW chain mc(all domains)

3D Structure

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Related Domains

Browse other domains in Trypsin,Thrombin_light →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyTrypsin,Thrombin_light(1.1.5.2)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Sodium ionNA
metal
(2R,3AS,6R,7AS)-N-(2-{1-[AMINO(IMINO)METHYL]-2,5-DIHYDRO-1H-PYRROL-3-YL}ETHYL)-6-HYDROXY-1-{N-[(2S)-2-HYDROXY-3-PHENYLPROPANOYL]PHENYLALANYL}OCTAHYDRO-1H-INDOLE-2-CARBOXAMIDEOSC

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

PF09396Thrombin_light

Thrombin light chain

External Links

ECOD PDB View: 1RIW RCSB PDB: 1RIW PDBe: 1RIW

Downloads

Download Domain PDB Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.