ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4k8b.3 - ECOD Domain | ECOD

ECOD/Domains/e4k8b.3

e4k8b.3

UID: 005347349

RepresentativePDB

Range: B:1-181,D:1-12
PDB: 4K8B chain mc(all domains)

3D Structure

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Related Domains

Browse other domains in Peptidase_S29 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPeptidase_S29(1.1.5.14)

Ligands

in contact, ≤ 4 Å

N-(tert-butylcarbamoyl)-3-methyl-L-valyl-(4R)-N-[(1R,2S)-1-carboxy-2-ethenylcyclopropyl]-4-[(7-methoxy-2-phenylquinolin-4-yl)oxy]-L-prolinamide1RR
Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Pfam Families

PF02907Peptidase_S29

Hepatitis C virus NS3 protease

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 4K8B RCSB PDB: 4K8B PDBe: 4K8B

Downloads

Download Domain PDB Full PDB Structure

Sulfate ion

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.