ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3d4yA2 - ECOD Domain | ECOD

ECOD/Domains/e3d4yA2

e3d4yA2

UID: 000053657

PDB

Range: A:412-522
PDB: 3D4Y chain A(all domains)
UniProt: Q24451 (all domains)
Gene: alpha-Man-IIa

Molecule: Alpha-mannosidase 2

3D Structure

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Related Domains

Browse other domains in Alpha-mann_mid →

Classification

AArchitecturealpha bundles(a.7)

XX-groupimmunoglobulin/albumin-binding domain-like(632)

HH-groupFamilies 57/38 glycoside transferase middle domain(632.1)

TT-groupFamilies 57/38 glycoside transferase middle domain(632.1.1)

FFamilyAlpha-mann_mid(632.1.1.3)

Ligands

in contact, ≤ 4 Å

(5R,6R,7S,8R)-5-(HYDROXYMETHYL)-5,6,7,8-TETRAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOLMVL
Zinc ionZN
metal

+ 1 additive ((4S)-2-METHYL-2,4-PENTANEDIOL)

(4S)-2-METHYL-2,4-PENTANEDIOL

Pfam Families

PF09261Alpha-mann_mid

Alpha mannosidase middle domain

ClanCL0599GH57_38_middle

External Links

ECOD PDB View: 3D4Y RCSB PDB: 3D4Y PDBe: 3D4Y UniProt: Q24451

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.