ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1q0dI1 - ECOD Domain | ECOD

ECOD/Domains/e1q0dI1

e1q0dI1

UID: 000054541

PDB

Range: I:1-117
PDB: 1Q0D chain I(all domains)
UniProt: P80734 (all domains)
Gene: sodN

Molecule: Superoxide dismutase [Ni]

3D Structure

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Related Domains

Browse other domains in Sod_Ni →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupNickel-containing superoxide dismutase, NiSOD(601.12)

TT-groupNickel-containing superoxide dismutase, NiSOD(601.12.1)

FFamilySod_Ni(601.12.1.1)

Ligands

in contact, ≤ 4 Å

NICKEL (III) ION3NI
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Nickel-containing superoxide dismutase

External Links

ECOD PDB View: 1Q0D RCSB PDB: 1Q0D PDBe: 1Q0D UniProt: P80734

Downloads

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