ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1j6wA1 - ECOD Domain | ECOD

ECOD/Domains/e1j6wA1

e1j6wA1

UID: 000005493

RepresentativePDB

Range: A:3-163
PDB: 1J6W chain A(all domains)
UniProt: P44007 (all domains)
Gene: luxS

Molecule: AUTOINDUCER-2 PRODUCTION PROTEIN LUXS

3D Structure

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Related Domains

Browse other domains in LuxS →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLuxS, MPP, ThrRS/AlaRS common domain(309)

HH-groupLuxS, MPP, ThrRS/AlaRS common domain(309.1)

TT-groupLuxS/MPP-like metallohydrolase(309.1.1)

FFamilyLuxS(309.1.1.3)

Ligands

in contact, ≤ 4 Å

MethionineMET
drugDrugBank DB00134
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

S-Ribosylhomocysteinase (LuxS)

ClanCL0094Peptidase_ME

External Links

ECOD PDB View: 1J6W RCSB PDB: 1J6W PDBe: 1J6W UniProt: P44007

Downloads

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